PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g25540.7
Common NameLR48_Vigan02g009800
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 84aa    MW: 9533.35 Da    PI: 4.4433
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g25540.7genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2224.1e-071243356
             AP2 33 lgkfgtaeeAakaaiaarkklege 56
                    lg+f tae+Aa+a+++a+ +++g+
  Vang06g25540.7  1 LGTFTTAEDAARAYDRAAYAMRGP 24
                    79*******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.851131IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-13133IPR001471AP2/ERF domain
SMARTSM003800.0021137IPR001471AP2/ERF domain
SuperFamilySSF541712.42E-10133IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    Send to blast
LGTFTTAEDA ARAYDRAAYA MRGPFAVLNF PDEYPPLSTS SHGHVERRGR NEDENQVFEF  60
EYFDDKLLEE LLGYDEDKSK HGK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150411e-73AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014511322.18e-28PREDICTED: ethylene-responsive transcription factor ERF096-like
SwissprotQ9LTC58e-19ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A0L9TTQ66e-36A0A0L9TTQ6_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SUU25e-36A0A0S3SUU2_PHAAN; Uncharacterized protein
STRINGGLYMA02G00890.11e-19(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04370.14e-12Ethylene-responsive element binding factor 14
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]